{"id":70,"date":"2018-12-11T16:31:24","date_gmt":"2018-12-11T16:31:24","guid":{"rendered":"http:\/\/mribeirodantas.xyz\/blog\/?page_id=70"},"modified":"2020-08-19T04:35:04","modified_gmt":"2020-08-19T02:35:04","slug":"interesting-links","status":"publish","type":"page","link":"https:\/\/mribeirodantas.xyz\/blog\/index.php\/interesting-links\/","title":{"rendered":"Interesting links"},"content":{"rendered":"<span class=\"span-reading-time rt-reading-time\" style=\"display: block;\"><span class=\"rt-label rt-prefix\"><b>Reading time: <\/span> <span class=\"rt-time\"> 2<\/span> <span class=\"rt-label rt-postfix\">minutes<\/b><\/span><\/span>\n<p>Compilation of interesting links on the areas that I am interested in.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Blogroll<\/h3>\n\n\n\n<p><a href=\"http:\/\/causality.cs.ucla.edu\/blog\/\">Causal Analysis in Theory and Practice<\/a><br><a href=\"https:\/\/statmodeling.stat.columbia.edu\/\">Statistical Modeling, Causal Inference, and Social Science<\/a><br><a href=\"https:\/\/www.inference.vc\">inFERENCe<\/a><\/p>\n\n\n\n<h3 class=\"wp-block-heading\">R Programming<\/h3>\n\n\n\n<p><a href=\"https:\/\/cran.r-project.org\/manuals.html\"><\/a><strong>Courses<\/strong><br><a href=\"http:\/\/swcarpentry.github.io\/r-novice-ation\/\"><strong>Programming with R<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/software-carpentry.org\/\">Software Carpentry<\/a><br><a href=\"https:\/\/datacarpentry.org\/R-ecology-lesson\/\"><strong>Data Analysis and Visualization in R for Ecologists<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/datacarpentry.org\/\">Data Carpentry<\/a><br><a href=\"https:\/\/datacarpentry.org\/r-socialsci\/\"><strong>R for Social Scientists<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/datacarpentry.org\/\">Data Carpentry<\/a><br><a href=\"https:\/\/www.rstudio.com\/online-learning\/#R\"><strong>Online learning R<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/www.rstudio.com\/\">RStudio<\/a><br><a href=\"https:\/\/hackr.io\/tutorials\/learn-r\"><strong>Learn R<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/hackr.io\/\">Hackr.io<\/a><br><a href=\"https:\/\/www.kaggle.com\/learn\/r\"><strong>Learn R<\/strong><\/a> at <a href=\"https:\/\/www.kaggle.com\">Kaggle<\/a><br><\/p>\n\n\n\n<p><strong>Manuals<\/strong><br><a href=\"https:\/\/cran.r-project.org\/manuals.html\"><strong>Manuals<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/cran.r-project.org\/\">R Project<\/a><\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Bioinformatics<\/h3>\n\n\n\n<p><strong>Courses<\/strong><br><strong><a href=\"http:\/\/rosalind.info\/\">Rosalind<\/a><\/strong><br><a href=\"https:\/\/github.com\/ossu\/bioinformatics\"><strong>Path to a free self-taught education in Bioinformatics!<\/strong><\/a>&nbsp;on&nbsp;<a href=\"https:\/\/github.com\/ossu\">Ossu&#8217;s repository<\/a><br><a href=\"https:\/\/github.com\/applied-bioinformatics\/An-Introduction-To-Applied-Bioinformatics\"><strong>An Introduction To Applied Bioinformatics<\/strong><\/a>&nbsp;on&nbsp;<a href=\"https:\/\/github.com\/applied-bioinformatics\">Applied-bioinformatics&#8217; repository<\/a><br><br><strong>Other<\/strong><br><a href=\"http:\/\/www.ii.uib.no\/~inge\/list.html\"><strong>List compiled<\/strong><\/a>&nbsp;by&nbsp;<a href=\"http:\/\/www.ii.uib.no\/~inge\/\">Inge Jonassen<\/a><br><a href=\"https:\/\/links.bioinformatics.ca\/\"><strong>Another list<\/strong><\/a>&nbsp;at&nbsp;<a href=\"https:\/\/bioinformatics.ca\/\">Bioinformatics.ca<\/a><\/p>\n\n\n\n<p><strong>Papers&nbsp;on&nbsp;Machine Learning&nbsp;and&nbsp;Bioinformatics&nbsp;from&nbsp;<a href=\"https:\/\/www.quora.com\/What-are-some-examples-of-data-science-use-in-bioinformatics\">here<\/a>.<\/strong><\/p>\n\n\n\n<p>Genomics<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Coding Region Identification (<a href=\"http:\/\/bit.ly\/1IRU7ea\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1IRU7ea<\/a>)<\/li><li>Gene Function Comparison (<a href=\"http:\/\/bit.ly\/1LiknBN\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1LiknBN<\/a>)<\/li><li>Gene Function Prediction (<a href=\"http:\/\/bit.ly\/1BrpLPC\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1BrpLPC<\/a>)<\/li><li>RNA Gene Finding (<a href=\"http:\/\/bit.ly\/1RdY8LG\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1RdY8LG<\/a>)<\/li><li>Alternative Splicing (<a href=\"http:\/\/bit.ly\/1LikGfO\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1LikGfO<\/a>)<\/li><li>Sequence Assembly (<a href=\"http:\/\/bit.ly\/1GTFpne\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1GTFpne<\/a>)<\/li><li>Splice Site Prediction (<a href=\"http:\/\/bit.ly\/1Fq0aSe\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1Fq0aSe<\/a>)<\/li><li>TF Binding (<a href=\"http:\/\/bit.ly\/1eskz3U\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1eskz3U<\/a>)<\/li><li>Promoter Binding (<a href=\"http:\/\/bit.ly\/1d4MRQl\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1d4MRQl<\/a>)<\/li><li>Operon (<a href=\"http:\/\/bit.ly\/1IRUXHE\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1IRUXHE<\/a>)<\/li><li>Single Nucleotide Polymorphism (<a href=\"http:\/\/bit.ly\/1G8Ytdy\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1G8Ytdy<\/a>)<br><\/li><li>RNA Structure Prediction (<a href=\"http:\/\/bit.ly\/1H22QN7\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1H22QN7<\/a>)<\/li><\/ul>\n\n\n\n<p>Proteomics<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Protein Function Prediction (<a href=\"http:\/\/bit.ly\/1IRW8Hd\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1IRW8Hd<\/a>)<\/li><li>Protein Location Prediction (<a href=\"http:\/\/bit.ly\/1d4OAoU\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1d4OAoU<\/a>)<\/li><li>Protein Structure Prediction (<a href=\"http:\/\/bit.ly\/1HZzgqv\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1HZzgqv<\/a>)<\/li><li>Protein-Protein Interaction (<a href=\"http:\/\/bit.ly\/1Re1Kh1\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1Re1Kh1<\/a>)<\/li><\/ul>\n\n\n\n<p>Text Mining&nbsp;<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Word Disambiguation (<a href=\"http:\/\/bit.ly\/1InymjD\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1InymjD<\/a>)<\/li><li>Protein Annotation (<a href=\"http:\/\/bit.ly\/1MQn6zD\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1MQn6zD<\/a>)<\/li><li>Gene Annotation (<a href=\"http:\/\/bit.ly\/1GkIs3s\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1GkIs3s<\/a>)<\/li><\/ul>\n\n\n\n<p>Systems Biology<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Signaling Networks (<a href=\"http:\/\/bit.ly\/1Tz9q1c\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1Tz9q1c<\/a>)<\/li><li>Metabolic Pathways (<a href=\"http:\/\/bit.ly\/1GTJpo0\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1GTJpo0<\/a>)<\/li><li>Genetic Networks (<a href=\"http:\/\/bit.ly\/1H244rG\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1H244rG<\/a>)<\/li><\/ul>\n\n\n\n<p>Microarray<\/p>\n\n\n\n<ul class=\"wp-block-list\"><li>Microarray Data Analysis (<a href=\"http:\/\/bit.ly\/1LinqtN\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1LinqtN<\/a>)<\/li><li>Microarray Data Preprocessing (<a href=\"http:\/\/bit.ly\/1LinrOn\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1LinrOn<\/a>)<\/li><li>Microarray Image Analysis (<a href=\"http:\/\/bit.ly\/1CfYvi0\" rel=\"noreferrer noopener\" target=\"_blank\">http:\/\/bit.ly\/1CfYvi0<\/a>)<\/li><\/ul>\n\n\n\n<h3 class=\"wp-block-heading\">Causal Inference Analysis<\/h3>\n\n\n\n<p><strong>Courses, classes and talks<\/strong><br><a href=\"https:\/\/www.coursera.org\/learn\/crash-course-in-causality\/\">A Crash Course in Causality on Coursera<\/a>&nbsp;by&nbsp;<a href=\"https:\/\/twitter.com\/jasonroy\">Jason Roy<\/a><br><a href=\"https:\/\/www.edx.org\/es\/course\/causal-diagrams-draw-assumptions-harvardx-ph559x\">Causal Diagrams: Draw Your Assumptions Before Your Conclusions<\/a>&nbsp;by&nbsp;<a href=\"https:\/\/www.hsph.harvard.edu\/miguel-hernan\/\">Miguel Hern\u00e1n<\/a><br><a href=\"https:\/\/www.youtube.com\/user\/DukeEHDi\/playlists?sort=da&amp;view=1&amp;flow=grid\">Causal Inference Bootcamp on YouTube<\/a>&nbsp;by&nbsp;<a href=\"https:\/\/twitter.com\/mattmasten\">Matt Masten<\/a><br><a href=\"https:\/\/www.youtube.com\/watch?v=zvrcyqcN9Wo\">Causality on YouTube<\/a>&nbsp;by&nbsp;<a href=\"http:\/\/web.math.ku.dk\/~peters\/\">Jonas Peters<\/a><br><a href=\"https:\/\/www.youtube.com\/watch?v=sGRzQbRw2AU\">Causal Graphs<\/a> by <a href=\"http:\/\/www.julianschuessler.net\/\">Julian Sch\u00fcssler<\/a><br><a href=\"https:\/\/www.udemy.com\/course\/causal-data-science\/\">Causal Data Science with Directed Acyclic Graphs<\/a> by <a href=\"https:\/\/p-hunermund.com\/\">Paul H\u00fcnermund<\/a><br><br><strong>Books<\/strong><br><a href=\"http:\/\/bayes.cs.ucla.edu\/WHY\/\">The Book of Why<\/a>&nbsp;by&nbsp;<a href=\"https:\/\/twitter.com\/yudapearl\">Judea Pearl<\/a> et al<br><a href=\"https:\/\/www.amazon.com\/Causal-Inference-Statistics-Judea-Pearl\/dp\/1119186846\">Causal Inference in Statistics &#8211; A Primer<\/a> by&nbsp;<a href=\"https:\/\/twitter.com\/yudapearl\">Judea Pearl<\/a> et al<br><a href=\"https:\/\/www.amazon.com.br\/Causality-Reasoning-Inference-Judea-Pearl\/dp\/052189560X\">Causality: Models, Reasoning and Inference<\/a> by&nbsp;<a href=\"https:\/\/twitter.com\/yudapearl\">Judea Pearl<\/a> et al<br><a href=\"https:\/\/www.hsph.harvard.edu\/miguel-hernan\/causal-inference-book\/\">Causal Inference Book<\/a>&nbsp;by&nbsp;<a href=\"https:\/\/twitter.com\/_MiguelHernan\">Miguel Hernan<\/a> et al<br><a href=\"http:\/\/web.math.ku.dk\/~peters\/elements.html\">Elements of Causal Inference<\/a> by Jonas Peters et al<br><br><strong>Conferences<\/strong><br><a href=\"https:\/\/nips.cc\/\">Conference on Neural Information Processing Systems<\/a> (12\/2019)<br><a href=\"http:\/\/ecmlpkdd2019.org\/\">European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases<\/a> (09\/2019)<br><a href=\"http:\/\/nugget.unisa.edu.au\/CD2019\/\">ACM SIGKDD Workshop on Causal Discovery<\/a> (08\/2019)<br><a href=\"https:\/\/why19.causalai.net\/\">AAAI Spring Symposium<\/a> (03\/2019)<br><a href=\"https:\/\/eurocim2019.bips.eu\/home.html\">European Causal Inference Meeting (EuroCIM)<\/a> (03\/2019)<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Scientific Writing<\/h3>\n\n\n\n<p><strong>Books and articles<\/strong><br><a href=\"https:\/\/docs.google.com\/viewer?url=https%3A%2F%2Fjordanbpeterson.com%2Fwp-content%2Fuploads%2F2018%2F02%2FEssay_Writing_Guide.docx\"><strong>Writing guide<\/strong><\/a>&nbsp;by&nbsp;<a href=\"https:\/\/twitter.com\/jordanbpeterson\">Jordan Peterson<\/a><br><a href=\"https:\/\/students.uu.nl\/sites\/default\/files\/ge0-aw-guide-for-scientific-writing-2016.pdf\"><strong>A guide for scientific writing<\/strong><\/a>&nbsp;by&nbsp;<a href=\"https:\/\/www.uu.nl\/\">Utrecht University<\/a><br><a href=\"http:\/\/medicine.kaums.ac.ir\/uploadedfiles\/files\/successful_scientific_writing.pdf\"><strong>Successful scientific writing<\/strong><\/a>&nbsp;by&nbsp;<a href=\"https:\/\/play.google.com\/store\/books\/details?id=tKLjBAAAQBAJ&amp;rdid=book-tKLjBAAAQBAJ&amp;rdot=1&amp;source=gbs_vpt_read&amp;pcampaignid=books_booksearch_viewport\">Janice and Robert Matthews<\/a><br><a href=\"https:\/\/globalhealth.stanford.edu\/content\/dam\/sm\/globalhealth\/documents\/Research\/A%20Guide%20to%20Quantitative%20Scientific%20Writing%20V%2023.pdf\"><strong>A Guide to Quantitative Writing in the Health Sciences<\/strong><\/a>&nbsp;by&nbsp;<a href=\"https:\/\/woods.stanford.edu\/people\/stephen-luby\">Steve Luby and Dorothy Southern<\/a><br><a href=\"https:\/\/estudijas.rtu.lv\/pluginfile.php\/878601\/mod_folder\/content\/0\/2015.%20-%202016.%20studiju%20gads\/Materi%C4%81li%20semin%C4%81ru%20ciklam%20par%20IMRaD\/4%20Additional%20materials\/Science%20Writing%20E-books\/NonNative_science_writing.pdf?forcedownload=1\"><strong>Science Research Writing for Non-Native Speakers of English<\/strong><\/a>&nbsp;by&nbsp;<a href=\"http:\/\/mribeirodantas.xyz\/#\">Hilary Glasman-Deal<\/a><\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Productivity<\/h3>\n\n\n\n<p><a href=\"https:\/\/www.customlogocases.com\/blog\/productivity-tips\/\">Work Productivity Tips: Get More Done In Less Time<\/a> at CustomLogoCases.<\/p>\n<script type=\"text\/javascript\"> toolTips('.classtoolTips0','Continuous Machine Learning is the equivalent of Continuous Integration and Continuous Delivery (CI\/CD) for Machine Learning.'); <\/script>","protected":false},"excerpt":{"rendered":"<p><span class=\"span-reading-time rt-reading-time\" style=\"display: block;\"><span class=\"rt-label rt-prefix\"><b>Reading time: <\/span> <span class=\"rt-time\"> 2<\/span> <span class=\"rt-label rt-postfix\">minutes<\/b><\/span><\/span>Compilation of interesting links on the areas that I am interested in. Blogroll Causal Analysis in Theory and PracticeStatistical Modeling, Causal Inference, and Social ScienceinFERENCe R Programming CoursesProgramming with R&nbsp;at&nbsp;Software CarpentryData Analysis and Visualization in R for Ecologists&nbsp;at&nbsp;Data CarpentryR for Social Scientists&nbsp;at&nbsp;Data CarpentryOnline learning R&nbsp;at&nbsp;RStudioLearn R&nbsp;at&nbsp;Hackr.ioLearn R at Kaggle ManualsManuals&nbsp;at&nbsp;R Project Bioinformatics CoursesRosalindPath to a &#8230;<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":-1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_uag_custom_page_level_css":"","jetpack_post_was_ever_published":false,"footnotes":""},"class_list":["post-70","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.4 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Interesting links - The Dataist Storyteller<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/mribeirodantas.xyz\/blog\/index.php\/interesting-links\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Interesting links - The Dataist Storyteller\" \/>\n<meta property=\"og:description\" content=\"Reading time:  2 minutesCompilation of interesting links on the areas that I am interested in. 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